Hello all,
I’m facing problems when trying to build O2 on my machine (with Ubuntu 18.04 LTS).
All the packages prior to O2 compile correctly, but I get errors when aliBuild tries to compile O2 itself.
The command I used is aliBuild build O2 --defaults o2.
I also didn’t get errors when calling aliDoctor for the O2 prior to the installation.
I have uploaded the full log file at the following link:
and I’m reporting snippet of the relevant lines below, which seemingly refer to missing references to some Pythia8 methods.
Thanks for the help, dear regards,
Fabio
[…]
CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o: In function o2::eventgen::GeneratorPythia8::selectFromAncestor(int, Pythia8::Event&, Pythia8::Event&)': /home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/Event.h:69: undefined reference to vtable for Pythia8::Particle’
CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o: In function o2::eventgen::GeneratorPythia8::importParticles(Pythia8::Event&)': /home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/Event.h:410: undefined reference to vtable for Pythia8::Particle’
CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o: In function Pythia8::HadronLevel::onInitInfoPtr()': /home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HadronLevel.h:70: undefined reference to Pythia8::PhysicsBase::registerSubObject(Pythia8::PhysicsBase&)’
/home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HadronLevel.h:71: undefined reference to Pythia8::PhysicsBase::registerSubObject(Pythia8::PhysicsBase&)' /home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HadronLevel.h:72: undefined reference to Pythia8::PhysicsBase::registerSubObject(Pythia8::PhysicsBase&)’
/home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HadronLevel.h:73: undefined reference to Pythia8::PhysicsBase::registerSubObject(Pythia8::PhysicsBase&)' /home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HadronLevel.h:74: undefined reference to Pythia8::PhysicsBase::registerSubObject(Pythia8::PhysicsBase&)’
CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o:/home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HadronLevel.h:75: more undefined references to Pythia8::PhysicsBase::registerSubObject(Pythia8::PhysicsBase&)' follow CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o: In function void std::vector<Pythia8::Particle, std::allocatorPythia8::Particle >::_M_realloc_insert<Pythia8::Particle const&>(__gnu_cxx::__normal_iterator<Pythia8::Particle*, std::vector<Pythia8::Particle, std::allocatorPythia8::Particle > >, Pythia8::Particle const&)’:
/home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/Event.h:69: undefined reference to vtable for Pythia8::Particle' CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o: In function Pythia8::TauDecays::~TauDecays()’:
/home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HelicityMatrixElements.h:273: undefined reference to vtable for Pythia8::HMEHiggs2TwoFermions' /home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/HelicityMatrixElements.h:200: undefined reference to vtable for Pythia8::HMEX2TwoFermions’
CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o: In function Pythia8::Pythia::~Pythia()': /home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/Weights.h:28: undefined reference to vtable for Pythia8::WeightsBase’
CMakeFiles/O2lib-Generators.dir/src/GeneratorPythia8.cxx.o:(.data.rel.ro._ZTIN7Pythia816HelicityParticleE[_ZTIN7Pythia816HelicityParticleE]+0x10): undefined reference to typeinfo for Pythia8::Particle' CMakeFiles/O2lib-Generators.dir/src/DecayerPythia8.cxx.o: In function o2::eventgen::DecayerPythia8::Decay(int, TLorentzVector*)’:
/home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/Event.h:52: undefined reference to vtable for Pythia8::Particle' CMakeFiles/O2lib-Generators.dir/src/DecayerPythia8.cxx.o: In function o2::eventgen::DecayerPythia8::Decay(int, TLorentzVector*)’:
/home/colamaria/alice/sw/SOURCES/O2/v1.3.0/0/Generators/src/DecayerPythia8.cxx:80: undefined reference to Pythia8::Event::list(bool, bool, int) const' CMakeFiles/O2lib-Generators.dir/src/DecayerPythia8.cxx.o: In function std::vector<Pythia8::Particle, std::allocatorPythia8::Particle >::_M_default_append(unsigned long)’:
/usr/include/c++/7/ext/new_allocator.h:111: undefined reference to vtable for Pythia8::Particle' CMakeFiles/O2lib-Generators.dir/src/DecayerPythia8.cxx.o: In function std::vector<Pythia8::Particle, std::allocatorPythia8::Particle >::_M_default_append(unsigned long)’:
/usr/include/c++/7/bits/vector.tcc:600: undefined reference to vtable for Pythia8::Particle' CMakeFiles/O2lib-Generators.dir/src/DecayerPythia8.cxx.o: In function void std::vector<Pythia8::Particle, std::allocatorPythia8::Particle >::_M_realloc_insertPythia8::Particle(__gnu_cxx::__normal_iterator<Pythia8::Particle*, std::vector<Pythia8::Particle, std::allocatorPythia8::Particle > >, Pythia8::Particle&&)’:
/home/colamaria/alice/sw/ubuntu1804_x86-64/pythia/v8302-1/include/Pythia8/Event.h:69: undefined reference to `vtable for Pythia8::Particle’
[ 55%] Built target O2test-simulationdataformat-BasicHits
[ 55%] Built target O2lib-DataFormatsFDD
[ 56%] Built target O2lib-CPVBase
[ 56%] Linking CXX executable …/…/stage/tests/o2-test-simulationdataformat-MCTruthContainer
collect2: error: ld returned 1 exit status
Generators/CMakeFiles/O2lib-Generators.dir/build.make:579: recipe for target ‘stage/lib/libO2Generators.so’ failed
make[2]: *** [stage/lib/libO2Generators.so] Error 1
CMakeFiles/Makefile2:29959: recipe for target ‘Generators/CMakeFiles/O2lib-Generators.dir/all’ failed
make[1]: *** [Generators/CMakeFiles/O2lib-Generators.dir/all] Error 2