Dear expert,
I got an error in building O2Physics after updating macOS to venture 13.0.
The results of alidoctor are listed and the log file is
https://cernbox.cern.ch/s/lGrIqRoRttGeRCo
SUCCESS: Package CMake will be picked up from the system.
WARNING: Package libuv cannot be picked up from the system and will be built by aliBuild.
WARNING: This is due to the fact the following script fails:
WARNING:
WARNING: REQUESTED_VERSION=v1.40.0
WARNING: printf “#include <uv/version.h>\n#if UV_VERSION_HEX < 0x12a00\n#error libuv >=1.40.0 required\n#endif\n” | c++ -I$(brew --prefix libuv)/include -xc++ - -c -o /dev/null 2>&1
WARNING:
WARNING: with the following output:
WARNING:
WARNING: libuv: :1:10: fatal error: ‘uv/version.h’ file not found
WARNING: libuv: #include <uv/version.h>
WARNING: libuv: ^~~~~~~~~~~~~~
WARNING: libuv: 1 error generated.
WARNING:
WARNING: Package FFTW3 cannot be picked up from the system and will be built by aliBuild.
WARNING: This is due to the fact the following script fails:
WARNING:
WARNING: REQUESTED_VERSION=v3.3.9
WARNING: false
WARNING:
WARNING: with the following output:
WARNING:
WARNING: FFTW3:
WARNING:
SUCCESS: Required package Python-system will be picked up from the system.
SUCCESS: Package lz4 will be picked up from the system.
SUCCESS: Package zlib will be picked up from the system.
SUCCESS: Package FreeType will be picked up from the system.
WARNING: Package libwebsockets cannot be picked up from the system and will be built by aliBuild.
WARNING: This is due to the fact the following script fails:
WARNING:
WARNING: REQUESTED_VERSION=v3.0.1
WARNING: printf ‘#if !__has_include(<lws_config.h>)\n#error "Cannot find libwebsocket"\n#endif\n’ | c++ -I$(brew --prefix libwebsockets)/include -c -xc++ -std=c++17 - -o /dev/null
WARNING: printf ‘#include <lws_config.h>\n#if LWS_LIBRARY_VERSION_NUMBER < 2004000 || LWS_LIBRARY_VERSION_NUMBER >= 3001000\n#error "JAliEn-ROOT requires libwebsockets 3.0.x but other version was detected"\n#endif\n’ | c++ -c -x c++ -I$(brew --prefix libwebsockets)/include -std=c++17 - -o /dev/null || exit 1
WARNING:
WARNING: with the following output:
WARNING:
WARNING: libwebsockets: :2:2: error: “Cannot find libwebsocket”
WARNING: libwebsockets: #error “Cannot find libwebsocket”
WARNING: libwebsockets: ^
WARNING: libwebsockets: 1 error generated.
WARNING: libwebsockets: :1:10: fatal error: ‘lws_config.h’ file not found
WARNING: libwebsockets: #include <lws_config.h>
WARNING: libwebsockets: ^~~~~~~~~~~~~~
WARNING: libwebsockets: 1 error generated.
WARNING:
SUCCESS: Package libpng will be picked up from the system.
WARNING: Package lzma cannot be picked up from the system and will be built by aliBuild.
WARNING: This is due to the fact the following script fails:
WARNING:
WARNING: REQUESTED_VERSION=v5.2.3
WARNING: printf “#include <lzma.h>\n” | c++ -xc++ - -c -M 2>&1
WARNING:
WARNING: with the following output:
WARNING:
WARNING: lzma: :1:10: fatal error: ‘lzma.h’ file not found
WARNING: lzma: #include <lzma.h>
WARNING: lzma: ^~~~~~~~
WARNING: lzma: 1 error generated.
WARNING:
SUCCESS: Package bz2 will be picked up from the system.
SUCCESS: Required package Xcode will be picked up from the system.
SUCCESS: Package libxml2 will be picked up from the system.
SUCCESS: Required package osx-system-openssl will be picked up from the system.
SUCCESS: Package GSL will be picked up from the system.
WARNING: Package TBB cannot be picked up from the system and will be built by aliBuild.
WARNING: This is due to the fact the following script fails:
WARNING:
WARNING: REQUESTED_VERSION=v2021.5.0
WARNING: printf “#include <tbb/concurrent_unordered_map.h>\n static_assert(TBB_INTERFACE_VERSION >= 11009, "min version check failed");\n” | c++ -std=c++11 -xc++ - -c -o /dev/null
WARNING:
WARNING: with the following output:
WARNING:
WARNING: TBB: :1:10: fatal error: ‘tbb/concurrent_unordered_map.h’ file not found
WARNING: TBB: #include <tbb/concurrent_unordered_map.h>
WARNING: TBB: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
WARNING: TBB: 1 error generated.
WARNING:
WARNING: Package ofi cannot be picked up from the system and will be built by aliBuild.
WARNING: This is due to the fact the following script fails:
WARNING:
WARNING: REQUESTED_VERSION=v1.14.0
WARNING: pkg-config --atleast-version=1.6.0 libfabric 2>&1 && printf “#include "rdma/fabric.h"\nint main(){}” | cc -xc - -o /dev/null
WARNING:
WARNING: with the following output:
WARNING:
WARNING: ofi:
WARNING:
SUCCESS: Required package rsync will be picked up from the system.
SUCCESS: Package autotools will be picked up from the system.
==> The following packages will be built by aliBuild because
usage of a system version of it is not allowed or supported, by policy:
- Common-O2
- generators
- ninja
- Ppconsul
- double-conversion
- cgal
- ms_gsl
- VecGeom
- xsimd
- RapidJSON
- flatbuffers
- capstone
- GLFW
- ApMon-CPP
- pythia6
- fastjet
- UUID
- AliEn-CAs
- protobuf
- JAliEn-ROOT
- MLModels
- libInfoLogger
- simulation
- ROOT
- boost
- json-c
- GMP
- utf8proc
- XRootD
- re2
- O2
- FairMQ
- fmt
- Monitoring
- Vc
- asiofi
- vgm
- GEANT4_VMC
- O2Physics
- MCStepLogger
- VMC
- asio
- googlebenchmark
- O2-customization
- GEANT3
- defaults-release
- Configuration
- KFParticle
- FairLogger
- arrow
- pythia
- AliEn-Runtime
- Alice-GRID-Utils
- lhapdf
- ZeroMQ
- alibuild-recipe-tools
- libjalienO2
- FairCMakeModules
- MPFR
- ONNXRuntime
- xjalienfs
- curl
- GEANT4
- HepMC3
- DebugGUI
- FairRoot
==> The following packages will be picked up from the system:
- libpng
- zlib
- GSL
- libxml2
- autotools
- FreeType
- CMake
- lz4
- bz2
If this is not you want, you have to uninstall / unload them.
==> The following packages will be built by aliBuild because they couldn’t be picked up from the system:
- lzma
- libuv
- TBB
- ofi
- libwebsockets
- FFTW3
This is not a real issue, but it might take longer the first time you invoke aliBuild.
Look at the error messages above to get hints on what packages you need to install separately.
Please suggest something.