After fresh installation of O2 on ubuntu18.04 and CentOS7, I have got the same crash after sending the following simulation test:
o2-sim-serial -m MFT -e TGeant4 -g boxgen -n 0
See the crash message in the attached file.
If someone have any idea…?
out.txt (34.9 KB)
More explicit crash message:
[
O2/latest-dev-o2] ~/alice $> o2-sim -m MFT -e TGeant3 -g boxgen -n 1
[INFO] This is o2-sim version 1.2.0 (c2d5cf418)
[INFO] Built by ALIBUILD:1.8.0, ALIDIST-REV:38b2a5b9793016058c3a0cab69d5f6c509870f2d on OS:Linux-5.4.0-125-generic
[INFO] BINDING TO ADDRESS ipc:///tmp/o2sim-notifications-13174 type pub
[INFO] Running with 2 sim workers
[INFO] CREATING SIM SHARED MEM SEGMENT FOR 2 WORKERS
Spawning particle server on PID 13177; Redirect output to o2sim_serverlog
Spawning sim worker 0 on PID 13179; Redirect output to o2sim_workerlog0
Spawning hit merger on PID 13180; Redirect output to o2sim_mergerlog
[INFO] Process 13179 EXITED WITH CODE 0 SIGNALED 1 SIGNAL 6
[INFO] Problem detected (or child received termination signal) … shutting down whole system
[INFO] TERMINATING 13177
[INFO] TERMINATING 13179
[INFO] TERMINATING 13180
[ERROR] SHUTTING DOWN DUE TO SIGNALED EXIT IN COMPONENT 13179
[INFO] Merger process 13180 returned
[INFO] Simulation process took 27.4611 s
[O2/latest-dev-o2] ~/alice $>
[O2/latest-dev-o2] ~/alice $>
[O2/latest-dev-o2] ~/alice $>
[O2/latest-dev-o2] ~/alice $>
[O2/latest-dev-o2] ~/alice $> o2-sim-serial -m MFT -e TGeant3 -g boxgen -n 1
[10:10:03][INFO] Init CcdApi with UserAgentID: clraliceport15-1667380203-PkIIk3, Host: https://alice-ccdb.cern.ch/
[10:10:03][INFO] Init CcdApi with UserAgentID: clraliceport15-1667380203-PkIIk3, Host: https://alice-ccdb.cern.ch
[10:10:03][ERROR] Could not setup CCDB connection
[10:10:04][INFO] RNG INITIAL SEED 2957069386520985616
[10:10:04][INFO] Media file used: /home/manso/alice/sw/ubuntu1804_x86-64/O2/dev-local1/share/Detectors/Geometry/media.geo
[10:10:04][INFO] MagneticField::CreateField: Maximim possible beam energy for requested beam is assumed
[10:10:04][INFO] MagneticField::Print: Maps:
[10:10:04][INFO] MagneticField::Print: Solenoid (-1*)5 kG, Dipole ON (-1)
[10:10:04][INFO] MagneticField::Print: Machine B fields for p-p beam (7000 GeV): QGrad: 22.0002 Dipole: 37.8781
[10:10:04][INFO] MagneticField::Print: Uses Sol30_Dip6_Hole of $(O2_ROOT)/share/Common/maps/mfchebKGI_sym.root
[10:10:04][INFO] Activating MFT module
[10:10:04][INFO] Reading out MFT detector
*** TDatabasePDG::AddParticle: particle with PDGcode=3124 already defined
*** TDatabasePDG::AddAntiParticle: can’t redefine parameters
[10:10:04][INFO] Init generic box generator with following parameters
[10:10:04][INFO] BoxGun.pdg : 211 [ CODE ]
BoxGun.number : 10 [ CODE ]
BoxGun.eta[0] : -1 [ CODE ]
BoxGun.eta[1] : 1 [ CODE ]
BoxGun.prange[0] : 0.1 [ CODE ]
BoxGun.prange[1] : 5 [ CODE ]
BoxGun.phirange[0] : 0 [ CODE ]
BoxGun.phirange[1] : 360 [ CODE ]
BoxGun.debug : false [ CODE ]
[10:10:04][INFO] Reading out MFT detector
[10:10:04][INFO] O2RUNSIM SPECIFIC INIT CALLED
[10:10:04][INFO] FairRootFileSink initialized.
[10:10:04][INFO] - cbmroot_0
[10:10:04][INFO] - o2sim.root
Info in TGeoManager::TGeoManager: Geometry FAIRGeom, FAIR geometry created
[10:10:04][INFO] FairGeoMedia: Read media
[10:10:04][INFO] MagFieldContFact::createContainer: Creating mag.field container MagFieldParam
[10:10:04][INFO] Loading simulation plugin libO2G3Setup
[10:10:04][INFO] Setting up G3 sim from library code
MZSTOR. ZEBRA table base TAB(0) in /MZCC/ at adr 688417655 29086B77 HEX
MZSTOR. Initialize Store 0 in /GCBANK/
with Store/Table at absolute adrs 682971997 688417655
HEX 28B5535D 29086B77
HEX FFACE5D2 0
relative adrs -5446190 0
with 1 Str. in 2 Links in 5300 Low words in 4999970 words.
This store has a fence of 16 words.
MZLOGL. Set Log Level 0 for store 0
1***** GEANT Version 3.21/11 Released on 100298
0***** Correction Cradle Version 0.1100
MZDIV. Initialize Division Constant in Store 0
NW/NWMAX= 20004000000, MODE/KIND= 1 2
Division 20 initialized.
MZLINK. Initialize Link Area /GCLINK/ for Store 0 NL/NS= 20 20
MZLINK. Initialize Link Area /GCSLNK/ for Store 0 NL/NS= 100 100
-I- G3Config: Geant3 with TGeo has been created.
[10:10:04][INFO] Stack.storeSecondaries : true [ CODE ]
Stack.pruneKine : true [ CODE ]
Stack.transportPrimary : all [ CODE ]
Stack.transportPrimaryFileName : [ CODE ]
Stack.transportPrimaryFuncName : [ CODE ]
Stack.transportPrimaryInvert : false [ CODE ]
------------------------------------------------------------------------------------
| |
| ------------------------------------------------------------------------------ |
| | | |
| | | |
| | PPP Y Y TTTTT H H III A Welcome to the Lund Monte Carlo! | |
| | P P Y Y T H H I A A This is PYTHIA version 8.304 | |
| | PPP Y T HHHHH I AAAAA Last date of change: 9 Apr 2021 | |
| | P Y T H H I A A | |
| | P Y T H H III A A Now is 02 Nov 2022 at 10:10:04 | |
| | | |
| | Christian Bierlich; Department of Astronomy and Theoretical Physics, | |
| | Lund University, Solvegatan 14A, SE-223 62 Lund, Sweden; | |
| | e-mail: christian.bierlich@thep.lu.se | |
| | Nishita Desai; Department of Theoretical Physics, Tata Institute, | |
| | Homi Bhabha Road, Mumbai 400005, India; | |
| | e-mail: desai@theory.tifr.res.in | |
| | Leif Gellersen; Department of Astronomy and Theoretical Physics, | |
| | Lund University, Solvegatan 14A, SE-223 62 Lund, Sweden; | |
| | e-mail: leif.gellersen@thep.lu.se | |
| | Ilkka Helenius; Department of Physics, University of Jyvaskyla, | |
| | P.O. Box 35, FI-40014 University of Jyvaskyla, Finland; | |
| | e-mail: ilkka.m.helenius@jyu.fi | |
| | Philip Ilten; Department of Physics, | |
| | University of Cincinnati, Cincinnati, OH 45221, USA; | |
| | e-mail: philten@cern.ch | |
| | Leif Lonnblad; Department of Astronomy and Theoretical Physics, | |
| | Lund University, Solvegatan 14A, SE-223 62 Lund, Sweden; | |
| | e-mail: leif.lonnblad@thep.lu.se | |
| | Stephen Mrenna; Computing Division, Simulations Group, | |
| | Fermi National Accelerator Laboratory, MS 234, Batavia, IL 60510, USA; | |
| | e-mail: mrenna@fnal.gov | |
| | Stefan Prestel; Department of Astronomy and Theoretical Physics, | |
| | Lund University, Solvegatan 14A, SE-223 62 Lund, Sweden; | |
| | e-mail: stefan.prestel@thep.lu.se | |
| | Christian Preuss; School of Physics and Astronomy, | |
| | Monash University, PO Box 27, 3800 Melbourne, Australia; | |
| | e-mail: christian.preuss@monash.edu | |
| | Torbjorn Sjostrand; Department of Astronomy and Theoretical Physics, | |
| | Lund University, Solvegatan 14A, SE-223 62 Lund, Sweden; | |
| | e-mail: torbjorn@thep.lu.se | |
| | Peter Skands; School of Physics and Astronomy, | |
| | Monash University, PO Box 27, 3800 Melbourne, Australia; | |
| | e-mail: peter.skands@monash.edu | |
| | Marius Utheim; Department of Astronomy and Theoretical Physics, | |
| | Lund University, Solvegatan 14A, SE-223 62 Lund, Sweden; | |
| | e-mail: marius.utheim@thep.lu.se | |
| | Rob Verheyen; Department of Physics and Astronomy, | |
| | University College London, Gower St, Bloomsbury, London WC1E 6BT, UK; | |
| | e-mail: r.verheyen@ucl.ac.uk | |
| | | |
| | The main program reference is ‘An Introduction to PYTHIA 8.2’, | |
| | T. Sjostrand et al, Comput. Phys. Commun. 191 (2015) 159 | |
| | [arXiv:1410.3012 [hep-ph]] | |
| | | |
| | The main physics reference is the ‘PYTHIA 6.4 Physics and Manual’, | |
| | T. Sjostrand, S. Mrenna and P. Skands, JHEP05 (2006) 026 [hep-ph/0603175] | |
| | | |
| | An archive of program versions and documentation is found on the web: | |
| | PYTHIA | Department of Astronomy and Theoretical Physics | |
| | | |
| | This program is released under the GNU General Public Licence version 2. | |
| | Please respect the MCnet Guidelines for Event Generator Authors and Users. | |
| | | |
| | Disclaimer: this program comes without any guarantees. | |
| | Beware of errors and use common sense when interpreting results. | |
| | | |
| | Copyright (C) 2021 Torbjorn Sjostrand | |
| | | |
| | | |
| ------------------------------------------------------------------------------ |
| |
------------------------------------------------------------------------------------
[10:10:04][INFO] Init ‘DecayerPythia8’ with following parameters
[10:10:04][INFO] DecayerPythia8.config[0] : ${O2_ROOT}/share/Generators/pythia8/decays/base.cfg [ CODE ]
DecayerPythia8.config[1] : [ CODE ]
DecayerPythia8.config[2] : [ CODE ]
DecayerPythia8.config[3] : [ CODE ]
DecayerPythia8.config[4] : [ CODE ]
DecayerPythia8.config[5] : [ CODE ]
DecayerPythia8.config[6] : [ CODE ]
DecayerPythia8.config[7] : [ CODE ]
DecayerPythia8.verbose : false [ CODE ]
DecayerPythia8.showChanged : false [ CODE ]
[10:10:04][INFO] Reading configuration from file: /home/manso/alice/sw/ubuntu1804_x86-64/O2/dev-local1/share/Generators/pythia8/decays/base.cfg
------- PYTHIA Flag + Mode + Parm + Word + FVec + MVec + PVec + WVec Settings (changes only) ------------------
| |
| Name | Now | Default Min Max |
| | | |
| Init:showChangedParticleData | off | on |
| ProcessLevel:all | off | on |
| |
------- End PYTHIA Flag + Mode + Parm + Word + FVec + MVec + PVec + WVec Settings -----------------------------
[10:10:05][INFO] Setup global cuts and processes
[10:10:05][INFO] Set default settings for processes and cuts.
[10:10:05][INFO] Special process settings are enabled.
[10:10:05][INFO] Special cut settings are enabled.
[10:10:05][INFO] Adding custom particles to VMC
Error in TGeant3TGeo::SetParticle: Particle already exists.
Error in TGeant3TGeo::SetParticle: Particle already exists.
Particle -311 not in geant
Particle 311 not in geant
Error in TGeant3TGeo::SetParticle: Unknown particle transport.
Error in TGeant3TGeo::SetParticle: Unknown particle transport.
[10:10:05][INFO] Printing ‘SimUserDecay’ parameters
[10:10:05][INFO] SimUserDecay.pdglist : [ CODE ]
[10:10:05][INFO] Initialising primary generator
[10:10:05][INFO] Setting interaction diamond: position = {0,0,0} cm
[10:10:05][INFO] Setting interaction diamond: width = {0,0,0} cm
[10:10:05][INFO] FairBoxGenerator: particle with PDG =211 Found
[10:10:05][INFO] Field in CAVE: 2
[10:10:05][INFO] Setting up CAVE without ZDC
Info in TGeoManager::SetTopVolume: Top volume is cave. Master volume is cave
Info in TGeoNavigator::BuildCache: — Maximum geometry depth set to 100
[10:10:05][INFO] GeometryBuilder::buildGeometry volume name = MFT
Info in : Creating HeatExchanger_0_0
Creating MFT heat exchanger for disk0 bottom
Info in : … done HeatExchanger_0_0
Info in : Creating HeatExchanger_1_0
Creating MFT heat exchanger for disk1 bottom
Info in : … done HeatExchanger_1_0
Info in : Creating HeatExchanger_2_0
Creating MFT heat exchanger for disk2 bottom
Info in : … done HeatExchanger_2_0
Info in : Creating HeatExchanger_3_0
Creating MFT heat exchanger for disk3 bottom
Info in : … done HeatExchanger_3_0
Info in : Creating HeatExchanger_4_0
Creating MFT heat exchanger for disk4 bottom
Info in : … done HeatExchanger_4_0
Info in : Creating HeatExchanger_0_1
Creating MFT heat exchanger for disk0 top
Info in : … done HeatExchanger_0_1
Info in : Creating HeatExchanger_1_1
Creating MFT heat exchanger for disk1 top
Info in : … done HeatExchanger_1_1
Info in : Creating HeatExchanger_2_1
Creating MFT heat exchanger for disk2 top
Info in : … done HeatExchanger_2_1
Info in : Creating HeatExchanger_3_1
Creating MFT heat exchanger for disk3 top
Info in : … done HeatExchanger_3_1
Info in : Creating HeatExchanger_4_1
Creating MFT heat exchanger for disk4 top
Info in : … done HeatExchanger_4_1
Info in TGeoManager::CheckGeometry: Fixing runtime shapes…
Info in TGeoManager::CheckGeometry: …Nothing to fix
Info in TGeoManager::CloseGeometry: Counting nodes…
Info in TGeoManager::Voxelize: Voxelizing…
Info in TGeoManager::CloseGeometry: Building cache…
Info in TGeoManager::CountLevels: max level = 8, max placements = 138
Info in TGeoManager::CloseGeometry: 50040 nodes/ 24325 volume UID’s in FAIR geometry
Info in TGeoManager::CloseGeometry: ----------------modeler ready----------------
[10:10:08][INFO] TGeometry will not be imported to VMC
Warning in TGeoManager::CloseGeometry: geometry already closed
Info in TGeoManager::Export: Exporting ccdb_object FAIR geometry as root file. Optimizations streamed.
[10:10:09][INFO] Init CcdApi with UserAgentID: clraliceport15-1667380203-PkIIk3, Host: https://alice-ccdb.cern.ch/
[10:10:09][ALARM] Curl request to https://alice-ccdb.cern.ch//MFT/Calib/Align/1667380203849/ failed with result 60, response code: -1
[10:10:09][FATAL] Got nullptr from CCDB for path MFT/Calib/Align and timestamp 1667380203849
For later analysis we write a core dump to core_dump_13379
Abandon (core dumped)
Do you have your alien GRID token initialized? This is now needed essentially for all our processing.
(check with alien-token-info).
Also please make sure to have latest alidist + O2 etc. There was a fix in this area recently in JAlien.
You are right, the problem is coming from the CCDB access and I don’t have any token. I made an update of alidsit°o2 but same issue. It’s really tricky to need it while performing only poor simulations for geometry developpements… Is it not possible to avoid that at all?
Hi @manso,
To initialise your token (assuming you have a grid certificate), you can execute the following from your command line:
alien.py
To access to the files needed by the processing, if you have a copy of them on your disk, you can follow the advice at this link to force the processing to use your local files instead of trying to use the ones on the CCDB: Set specific ccdb storage.
Cheers
Hi @manso,
You could also disable alignment and then essentially no CCDB objects will be fetched.
This can be done with --configKeyValues="align-geom.mDetectors=none".
Thanks a lot!
Simulations are going well now, at least for GEANT3 using my ubuntu 18.04 laptop. Still the same crash under GEANT4. Fortunatly, I have another computer running Cent0S7 which runs fine on both GEANT.